Vol 6, No 2 (2012): Standards in Genomic Sciences
Table of Contents
Genome Report
Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4T) |
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| Alex Copeland, Xiaojing Zhang, Monica Misra, Alla Lapidus, Matt Nolan, Susan Lucas, Shweta Deshpande, Jan-Fang Cheng, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Chongle Pan, Cynthia D. Jeffries, John C. Detter, Evelyne-Marie Brambilla, Manfred Rohde, Olivier Duplex Djao, Markus Göker, Johannes Sikorski, Brian J. Tindall, Tanja Woyke, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk, Konstantinos Mavromatis |
Genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812T) |
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| Iain Anderson, Elizabeth Saunders, Alla Lapidus, Matt Nolan, Susan Lucas, Hope Tice, Tijana Glavina del Rio, Jan-Fang Cheng, Cliff Han, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Konstantios Mavromatis, Ioanna Pagani, Natalia Ivanova, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Eveylne-Marie Brambilla, Yun-juan Chang, Evelyne-Marie Brambilla, Manfred Rohde, Stefan Spring, Markus Göker, John C. Detter, Tanja Woyke, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk |
Complete genome sequence of Serratia plymuthica strain AS12 |
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| Saraswoti Neupane, Roger D. Finlay, Sadhna Alström, Lynne Goodwin, Nikos C. Kyrpides, Susan Lucas, Alla Lapidus, David Bruce, Sam Pitluck, Lin Peters, Galina Ovchinnikova, Olga Chertkov, James Han, Cliff Han, Roxanne Tapia, John C. Detter, Miriam L. Land, Loren Hauser, Jan-Fang Cheng, Natalia Ivanova, Ioanna Pagani, Hans-Peter Klenk, Tanja Woyke, Nils Högberg |
Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4T) |
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| Iain Anderson, Brittany Held, Alla Lapidus, Matt Nolan, Susan Lucas, Hope Tice, Tijana Glavina del Rio, Jan-Fang Cheng, Cliff Han, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Konstantinos Mavromatis, Ionna Pagani, Natalia Ivanova, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Evelyne Brambilla, Manfred Rohde, Stefan Spring, Markus Göker, John C. Detter, Tanja Woyke, James Bristow, Jonahtan A. Eisen, Victor Markowitz, Philip Hugenholtz, Hans-Peter Klenk, Nikos C. Kyrpides |
Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1T) |
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| Marcel Huntemann, Hazuki Teshima, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan-Fang Cheng, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailvova, Amrtica Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Chogle Pan, Evelyne Brambilla, Manfred Rohde, Stefan Spring, Markus Göker, John C. Detter, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk, Tanja Woyke |
Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1T), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the ... |
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| Birte Abt, Cliff Han, Carmen Scheuner, Megan Lu, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan-Fang Cheng, Roxanne Tapia, Lynne Goodwin, Sam Pitluck, Konstantinos Mavromatis, Natalia Mikhailova, Marcel Huntemann, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Evelyne Brambilla, Manfred Rohde, Stefan Spring, Sabine Gronow, Markus Göker, Tanja Woyke, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk, John C. Detter |
Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1) |
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| Konstantinos Mavromatis, Olga Chertkov, Alla Lapidus, Matt Nolan, Susan Lucas, Hope Tice, Tijana Glavina Del Rio, Jan-Fang Cheng, Cliff Han, Roxanne Tapia, David Bruce, Lynne A. Goodwin, Sam Pitluck, Marcel Huntemann, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Evelyne Brambilla, Manfred Rohde, Stefan Spring, Markus Göker, John C. Detter, James Bristow, Jonathan Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk, Tanja Woyke |
Community Dialog
Report of the 13th Genomic Standards Consortium Meeting, Shenzhen, China, March 4–7, 2012. |
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| Jack A Gilbert, Yiming Bao, Hui Wang, Susanna-Assunta Sansone, Scott C Edmunds, Norman Morrison, Folker Meyer, Lynn M Schriml, Neil Davies, Peter Sterk, Jared Wilkening, George M Garrity, Dawn Field, Robert Robbins, Daniel P Smith, Ilene Mizrachi, Corrie Moreau |
Genome sequences published outside of Standards in Genomic Sciences, March-April 2012 |
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| Oranmiyan W. Nelson, George M. Garrity |
This work is licensed under a Creative Commons Attribution 3.0 License.
Acknowledgements
We would like to gratefully acknowledge the support of many members of the Genomic Standards Consortium, the broader genomic science community, and those who have indicated their willingness to serve as editors, reviewers and contributors.
Funding for SIGS is provided by a grant from the Office of the Vice President for Research and Graduate Studies at Michigan State University, the Michigan State University Foundation, and the US Department of Energy Biological and Environmental Research DE-FG02-08ER64707.
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